Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.49■□□□□ 0.23
P04436 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
P04436 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
P04436 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.48■□□□□ 0.23
P04436 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
P04436 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.48■□□□□ 0.23
P04436 IGHV3-47-201ENST00000425060 335 ntBASIC16.48■□□□□ 0.23
P04436 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.48■□□□□ 0.23
P04436 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.48■□□□□ 0.23
P04436 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.48■□□□□ 0.23
P04436 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.48■□□□□ 0.23
P04436 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.48■□□□□ 0.23
P04436 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.48■□□□□ 0.23
P04436 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.48■□□□□ 0.23
P04436 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.48■□□□□ 0.23
P04436 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
P04436 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.48■□□□□ 0.23
P04436 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
P04436 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.47■□□□□ 0.23
P04436 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
P04436 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.47■□□□□ 0.23
P04436 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.47■□□□□ 0.23
P04436 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
P04436 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
P04436 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
P04436 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
P04436 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
P04436 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.47■□□□□ 0.23
P04436 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.47■□□□□ 0.23
P04436 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.47■□□□□ 0.23
P04436 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.47■□□□□ 0.23
P04436 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.47■□□□□ 0.23
P04436 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.47■□□□□ 0.23
P04436 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.47■□□□□ 0.23
P04436 AL353801.3-201ENST00000609898 542 ntBASIC16.47■□□□□ 0.23
P04436 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.47■□□□□ 0.23
P04436 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 AL138781.2-201ENST00000617896 1843 ntBASIC16.47■□□□□ 0.23
P04436 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
P04436 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.47■□□□□ 0.23
P04436 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.47■□□□□ 0.23
P04436 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 PHGDH-209ENST00000641074 1780 ntBASIC16.46■□□□□ 0.23
P04436 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
P04436 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.46■□□□□ 0.23
P04436 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
P04436 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.46■□□□□ 0.23
P04436 TSPY19P-201ENST00000418461 509 ntBASIC16.46■□□□□ 0.23
P04436 AL845331.1-201ENST00000424978 1190 ntBASIC16.46■□□□□ 0.23
P04436 TSPY18P-201ENST00000441642 509 ntBASIC16.46■□□□□ 0.23
P04436 AC091607.1-201ENST00000490318 1060 ntBASIC16.46■□□□□ 0.23
P04436 AP005901.3-202ENST00000581653 237 ntBASIC16.46■□□□□ 0.23
P04436 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
P04436 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms