Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF3O95398 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF3O95398 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 AQP6-203ENST00000551733 849 ntTSL 3 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 DUX4L27-201ENST00000554796 1261 ntBASIC26.9■■□□□ 1.9
RAPGEF3O95398 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF3O95398 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF3O95398 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
RAPGEF3O95398 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
RAPGEF3O95398 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 AC007274.1-201ENST00000439805 662 ntBASIC26.89■■□□□ 1.9
RAPGEF3O95398 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RAPGEF3O95398 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC26.89■■□□□ 1.9
RAPGEF3O95398 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
RAPGEF3O95398 NCF1C-201ENST00000438382 1427 ntBASIC26.89■■□□□ 1.89
RAPGEF3O95398 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 MIR661-201ENST00000384842 89 ntBASIC26.88■■□□□ 1.89
RAPGEF3O95398 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 AC023141.5-201ENST00000458585 616 ntBASIC26.88■■□□□ 1.89
RAPGEF3O95398 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 AC132938.6-201ENST00000623828 1655 ntBASIC26.88■■□□□ 1.89
RAPGEF3O95398 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
RAPGEF3O95398 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
RAPGEF3O95398 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 SLBP-205ENST00000488267 987 ntTSL 2 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 AC005225.4-201ENST00000557330 545 ntBASIC26.87■■□□□ 1.89
RAPGEF3O95398 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RAPGEF3O95398 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC26.87■■□□□ 1.89
RAPGEF3O95398 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 AC132938.5-201ENST00000624980 1813 ntBASIC26.86■■□□□ 1.89
RAPGEF3O95398 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 DDT-204ENST00000404092 805 ntTSL 3 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 FAM86GP-201ENST00000448322 971 ntBASIC26.86■■□□□ 1.89
RAPGEF3O95398 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 AL158211.5-201ENST00000623583 2518 ntBASIC26.86■■□□□ 1.89
RAPGEF3O95398 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.86■■□□□ 1.89
RAPGEF3O95398 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RAPGEF3O95398 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
RAPGEF3O95398 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.85■■□□□ 1.89
RAPGEF3O95398 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms