Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM13O60858 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRIM13O60858 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
TRIM13O60858 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM13O60858 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRIM13O60858 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
TRIM13O60858 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.79■□□□□ 0.44
TRIM13O60858 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM13O60858 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.79■□□□□ 0.44
TRIM13O60858 AP003041.3-201ENST00000527151 707 ntBASIC17.79■□□□□ 0.44
TRIM13O60858 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 AC104390.1-201ENST00000555663 520 ntBASIC17.79■□□□□ 0.44
TRIM13O60858 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.79■□□□□ 0.44
TRIM13O60858 AL023803.3-201ENST00000615559 522 ntBASIC17.79■□□□□ 0.44
TRIM13O60858 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.79■□□□□ 0.44
TRIM13O60858 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
TRIM13O60858 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRIM13O60858 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM13O60858 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM13O60858 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM13O60858 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM13O60858 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM13O60858 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM13O60858 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM13O60858 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM13O60858 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.78■□□□□ 0.44
TRIM13O60858 AP005242.2-201ENST00000580065 1175 ntBASIC17.78■□□□□ 0.44
TRIM13O60858 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
TRIM13O60858 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM13O60858 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM13O60858 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM13O60858 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM13O60858 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 ABHD17AP1-201ENST00000358206 933 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 RPS2P55-201ENST00000397318 883 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM13O60858 TSPY17P-201ENST00000450329 467 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 AC107956.1-201ENST00000494359 873 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 AL353719.1-201ENST00000566847 864 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 AP001412.1-201ENST00000608405 714 ntBASIC17.77■□□□□ 0.44
TRIM13O60858 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM13O60858 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM13O60858 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM13O60858 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
TRIM13O60858 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM13O60858 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms