Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
ATP2A1O14983 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 CALM1-205ENST00000553542 877 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2A1O14983 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2A1O14983 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2A1O14983 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
ATP2A1O14983 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.63■□□□□ 0.89
ATP2A1O14983 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 ESPNP-201ENST00000270691 2015 ntBASIC20.63■□□□□ 0.89
ATP2A1O14983 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A1O14983 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ATP2A1O14983 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.63■□□□□ 0.89
ATP2A1O14983 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP2A1O14983 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP2A1O14983 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2A1O14983 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP2A1O14983 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ATP2A1O14983 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP2A1O14983 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
ATP2A1O14983 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A1O14983 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP2A1O14983 AC073648.2-201ENST00000510116 352 ntBASIC20.62■□□□□ 0.89
ATP2A1O14983 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.62■□□□□ 0.89
ATP2A1O14983 AC023511.2-201ENST00000618803 211 ntBASIC20.62■□□□□ 0.89
ATP2A1O14983 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A1O14983 FAM215A-202ENST00000632077 792 ntBASIC20.62■□□□□ 0.89
ATP2A1O14983 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ATP2A1O14983 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP2A1O14983 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ATP2A1O14983 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
ATP2A1O14983 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
ATP2A1O14983 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.61■□□□□ 0.89
ATP2A1O14983 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.61■□□□□ 0.89
ATP2A1O14983 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A1O14983 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 AC093909.1-201ENST00000504731 1122 ntBASIC20.61■□□□□ 0.89
ATP2A1O14983 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A1O14983 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A1O14983 MIR7706-201ENST00000613747 67 ntBASIC20.61■□□□□ 0.89
ATP2A1O14983 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ATP2A1O14983 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A1O14983 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
ATP2A1O14983 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ATP2A1O14983 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ATP2A1O14983 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.61■□□□□ 0.89
ATP2A1O14983 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP2A1O14983 PMS2P1-201ENST00000431037 1228 ntBASIC20.6■□□□□ 0.89
ATP2A1O14983 HNRNPDP1-201ENST00000439535 754 ntBASIC20.6■□□□□ 0.89
ATP2A1O14983 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP2A1O14983 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP2A1O14983 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.6■□□□□ 0.89
ATP2A1O14983 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A1O14983 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2A1O14983 AF228730.7-201ENST00000641842 219 ntBASIC20.6■□□□□ 0.89
ATP2A1O14983 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP2A1O14983 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
ATP2A1O14983 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP2A1O14983 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms