Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM38O00635 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
TRIM38O00635 AC111152.3-201ENST00000569699 673 ntBASIC18.2■□□□□ 0.5
TRIM38O00635 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM38O00635 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM38O00635 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM38O00635 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM38O00635 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM38O00635 KRT18P1-202ENST00000452408 1331 ntBASIC18.2■□□□□ 0.5
TRIM38O00635 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM38O00635 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM38O00635 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM38O00635 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM38O00635 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM38O00635 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM38O00635 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM38O00635 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM38O00635 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRIM38O00635 FEM1AP3-201ENST00000403722 1741 ntBASIC18.19■□□□□ 0.5
TRIM38O00635 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM38O00635 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
TRIM38O00635 KRT18P23-201ENST00000435622 1283 ntBASIC18.19■□□□□ 0.5
TRIM38O00635 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM38O00635 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM38O00635 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM38O00635 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM38O00635 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM38O00635 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM38O00635 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM38O00635 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 AC004870.1-201ENST00000315132 882 ntBASIC18.18■□□□□ 0.5
TRIM38O00635 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM38O00635 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM38O00635 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 NUS1P1-201ENST00000446295 882 ntBASIC18.18■□□□□ 0.5
TRIM38O00635 FDX1P1-201ENST00000449115 551 ntBASIC18.18■□□□□ 0.5
TRIM38O00635 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.18■□□□□ 0.5
TRIM38O00635 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.18■□□□□ 0.5
TRIM38O00635 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.18■□□□□ 0.5
TRIM38O00635 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TRIM38O00635 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM38O00635 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM38O00635 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRIM38O00635 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM38O00635 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM38O00635 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM38O00635 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRIM38O00635 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.17■□□□□ 0.5
TRIM38O00635 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM38O00635 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.17■□□□□ 0.5
TRIM38O00635 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.17■□□□□ 0.5
TRIM38O00635 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.17■□□□□ 0.5
TRIM38O00635 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms