Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TAF4O00268 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 GPAT2P1-201ENST00000444924 1672 ntBASIC17.7■□□□□ 0.42
TAF4O00268 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.7■□□□□ 0.42
TAF4O00268 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 CROCCP3-202ENST00000420820 1947 ntBASIC17.7■□□□□ 0.42
TAF4O00268 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TAF4O00268 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TAF4O00268 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TAF4O00268 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.69■□□□□ 0.42
TAF4O00268 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TAF4O00268 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TAF4O00268 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.69■□□□□ 0.42
TAF4O00268 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TAF4O00268 MIR3917-201ENST00000580971 93 ntBASIC17.69■□□□□ 0.42
TAF4O00268 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 AL133373.2-201ENST00000623187 2828 ntBASIC17.69■□□□□ 0.42
TAF4O00268 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TAF4O00268 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 AL691432.2-201ENST00000607222 2038 ntBASIC17.69■□□□□ 0.42
TAF4O00268 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TAF4O00268 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 RPSAP43-201ENST00000402237 625 ntBASIC17.68■□□□□ 0.42
TAF4O00268 NUS1P2-201ENST00000417358 873 ntBASIC17.68■□□□□ 0.42
TAF4O00268 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.68■□□□□ 0.42
TAF4O00268 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 AC036111.1-201ENST00000533973 1582 ntBASIC17.68■□□□□ 0.42
TAF4O00268 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 AC139887.3-201ENST00000568585 713 ntBASIC17.68■□□□□ 0.42
TAF4O00268 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.68■□□□□ 0.42
TAF4O00268 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TAF4O00268 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
TAF4O00268 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.68■□□□□ 0.42
TAF4O00268 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.68■□□□□ 0.42
TAF4O00268 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TAF4O00268 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.68■□□□□ 0.42
TAF4O00268 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TAF4O00268 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TAF4O00268 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TAF4O00268 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TAF4O00268 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TAF4O00268 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.67■□□□□ 0.42
TAF4O00268 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
TAF4O00268 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TAF4O00268 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms