Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SRRM4A7MD48 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.57□□□□□ -0.08
SRRM4A7MD48 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 PVRIG2P-201ENST00000435460 978 ntBASIC14.56□□□□□ -0.08
SRRM4A7MD48 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.56□□□□□ -0.08
SRRM4A7MD48 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC14.56□□□□□ -0.08
SRRM4A7MD48 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SRRM4A7MD48 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 HTR7P1-202ENST00000624664 4411 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 AP000523.1-201ENST00000398242 1049 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 SLC25A3P1-201ENST00000443844 931 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 DUTP2-201ENST00000519164 463 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 AC010203.1-204ENST00000548782 407 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.55□□□□□ -0.08
SRRM4A7MD48 LTB4R2-202ENST00000528054 3092 ntBASIC14.55□□□□□ -0.08
SRRM4A7MD48 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SRRM4A7MD48 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SRRM4A7MD48 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
SRRM4A7MD48 AL023973.1-201ENST00000624619 620 ntBASIC14.54□□□□□ -0.08
SRRM4A7MD48 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms