Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 AC068137.2-201ENST00000605408 478 ntBASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 AL358472.5-202ENST00000641448 1267 ntBASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 AL805961.1-202ENST00000641562 540 ntBASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEM88BA6NKF7 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AL627223.1-201ENST00000416693 442 ntBASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AC051619.7-201ENST00000568314 623 ntBASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEM88BA6NKF7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 MIR943-201ENST00000401286 94 ntBASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AC245100.3-201ENST00000441281 285 ntBASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEM88BA6NKF7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 AC003669.1-201ENST00000334569 611 ntBASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 AC103564.2-201ENST00000432853 1299 ntBASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 OR7E47P-204ENST00000575924 449 ntBASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMEM88BA6NKF7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMEM88BA6NKF7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms