Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PALM3A6NDB9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PALM3A6NDB9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PALM3A6NDB9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PALM3A6NDB9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.83■□□□□ 0.93
PALM3A6NDB9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PALM3A6NDB9 AC125634.1-201ENST00000438758 1403 ntBASIC20.83■□□□□ 0.93
PALM3A6NDB9 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.83■□□□□ 0.92
PALM3A6NDB9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PALM3A6NDB9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PALM3A6NDB9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
PALM3A6NDB9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PALM3A6NDB9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PALM3A6NDB9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PALM3A6NDB9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PALM3A6NDB9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 AC022898.2-201ENST00000616822 1312 ntBASIC20.82■□□□□ 0.92
PALM3A6NDB9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 BNIP3P18-201ENST00000593976 575 ntBASIC20.82■□□□□ 0.92
PALM3A6NDB9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PALM3A6NDB9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PALM3A6NDB9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 FLJ13224-201ENST00000313737 1514 ntBASIC20.81■□□□□ 0.92
PALM3A6NDB9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC20.81■□□□□ 0.92
PALM3A6NDB9 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
PALM3A6NDB9 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PALM3A6NDB9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PALM3A6NDB9 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PALM3A6NDB9 TSPY19P-201ENST00000418461 509 ntBASIC20.8■□□□□ 0.92
PALM3A6NDB9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 TSPY18P-201ENST00000441642 509 ntBASIC20.8■□□□□ 0.92
PALM3A6NDB9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 AC099336.1-202ENST00000602961 463 ntBASIC20.8■□□□□ 0.92
PALM3A6NDB9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PALM3A6NDB9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PALM3A6NDB9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms