Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 AL023806.1-201ENST00000603994 1649 ntBASIC18.2■□□□□ 0.5
TCRBV9S1A1TA0A576 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 AC099398.1-201ENST00000567919 2776 ntBASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.19■□□□□ 0.5
TCRBV9S1A1TA0A576 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
TCRBV9S1A1TA0A576 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 TSPY7P-201ENST00000431358 1114 ntBASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 SEC1P-202ENST00000473944 940 ntBASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 AC010653.2-201ENST00000623505 997 ntBASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 AC133963.1-201ENST00000504166 1679 ntBASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.17■□□□□ 0.5
TCRBV9S1A1TA0A576 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms