Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 PMS2P1-201ENST00000431037 1228 ntBASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 AP001005.1-201ENST00000571755 1248 ntBASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGA9Q9Y5G4 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 AC090164.3-201ENST00000610780 2143 ntBASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 AL773604.1-201ENST00000617417 272 ntBASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGA9Q9Y5G4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
PCDHGA9Q9Y5G4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGA9Q9Y5G4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AL031598.1-201ENST00000561511 1773 ntBASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 AC141586.3-201ENST00000562166 1838 ntBASIC16.89■□□□□ 0.29
PCDHGA9Q9Y5G4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 Z98044.1-201ENST00000632503 1764 ntBASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 AP000593.1-201ENST00000393668 712 ntBASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 AC008687.5-201ENST00000593746 558 ntBASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGA9Q9Y5G4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms