Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2D4Q9Y2X8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AC036111.1-201ENST00000533973 1582 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 FSCN1P1-201ENST00000568912 1481 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AC073195.1-201ENST00000607241 877 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AL355312.1-201ENST00000407115 2176 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AP001094.4-201ENST00000579008 2176 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 AC106820.2-201ENST00000563775 3264 ntBASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2D4Q9Y2X8 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 AC084018.2-201ENST00000613093 2607 ntBASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 AC096733.2-201ENST00000609937 1394 ntBASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 APTR-205ENST00000447009 902 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 LINC00602-201ENST00000629776 2065 ntBASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2D4Q9Y2X8 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
UBE2D4Q9Y2X8 LINC01126-201ENST00000623515 1646 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms