Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.28□□□□□ -0.28
HHLA3Q9XRX5 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
HHLA3Q9XRX5 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AP005242.2-201ENST00000580065 1175 ntBASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 HEIH-201ENST00000623091 1652 ntBASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
HHLA3Q9XRX5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AC093827.2-201ENST00000512654 315 ntBASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 KRT8P32-201ENST00000512863 1461 ntBASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
HHLA3Q9XRX5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms