Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIT1Q9P2V4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIT1Q9P2V4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRIT1Q9P2V4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRIT1Q9P2V4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 AF186996.4-201ENST00000467186 377 ntBASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 AP001005.1-201ENST00000571755 1248 ntBASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 AL773604.1-201ENST00000617417 272 ntBASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.44■□□□□ 0.38
LRIT1Q9P2V4 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 CROCCP3-202ENST00000420820 1947 ntBASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 INTS4P1-201ENST00000438455 1935 ntBASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AL590627.1-203ENST00000421194 1026 ntBASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AC112698.1-201ENST00000510299 916 ntBASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRIT1Q9P2V4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 KRT18P67-201ENST00000432816 1264 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 MTDHP3-201ENST00000594186 672 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AC011467.2-201ENST00000598425 242 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AC120114.3-201ENST00000611923 658 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 BX640515.1-201ENST00000617215 977 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AL355877.3-201ENST00000622820 899 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AL031598.1-201ENST00000561511 1773 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 AC126763.1-201ENST00000552015 2118 ntBASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
LRIT1Q9P2V4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms