Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
DUX3Q96PT4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC009102.3-201ENST00000623118 1491 ntBASIC14.08□□□□□ -0.16
DUX3Q96PT4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC004263.2-201ENST00000617183 678 ntBASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC124864.1-201ENST00000623408 392 ntBASIC14.08□□□□□ -0.16
DUX3Q96PT4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
DUX3Q96PT4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 AC098818.2-201ENST00000564925 2320 ntBASIC14.08□□□□□ -0.16
DUX3Q96PT4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.08□□□□□ -0.16
DUX3Q96PT4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 MIR149-201ENST00000384879 89 ntBASIC14.07□□□□□ -0.16
DUX3Q96PT4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 AC138894.3-201ENST00000603787 634 ntBASIC14.07□□□□□ -0.16
DUX3Q96PT4 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
DUX3Q96PT4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 ANO7L1-203ENST00000602586 1720 ntBASIC14.07□□□□□ -0.16
DUX3Q96PT4 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
DUX3Q96PT4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 FOSL1P1-201ENST00000511041 816 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 KRT18P41-201ENST00000518924 1277 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AC074051.2-201ENST00000565115 352 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 AL732292.2-201ENST00000609649 430 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
DUX3Q96PT4 AL592071.1-201ENST00000611956 408 ntBASIC14.06□□□□□ -0.16
DUX3Q96PT4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.06□□□□□ -0.16
DUX3Q96PT4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms