Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.41■□□□□ 0.38
VPS33AQ96AX1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS33AQ96AX1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 MIR149-201ENST00000384879 89 ntBASIC17.4■□□□□ 0.38
VPS33AQ96AX1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 AL359736.2-201ENST00000621992 437 ntBASIC17.4■□□□□ 0.38
VPS33AQ96AX1 FAM197Y4-202ENST00000622692 608 ntBASIC17.4■□□□□ 0.38
VPS33AQ96AX1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS33AQ96AX1 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS33AQ96AX1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS33AQ96AX1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.38
VPS33AQ96AX1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
VPS33AQ96AX1 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.39■□□□□ 0.38
VPS33AQ96AX1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 AC097488.1-201ENST00000507834 756 ntBASIC17.39■□□□□ 0.37
VPS33AQ96AX1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 AC093010.1-201ENST00000473625 1624 ntBASIC17.39■□□□□ 0.37
VPS33AQ96AX1 LINC01126-201ENST00000623515 1646 ntBASIC17.39■□□□□ 0.37
VPS33AQ96AX1 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
VPS33AQ96AX1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
VPS33AQ96AX1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms