Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 GUSBP6-202ENST00000438529 1198 ntBASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
CKAP2Q8WWK9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 LINC01126-201ENST00000623515 1646 ntBASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CKAP2Q8WWK9 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 LINC00304-203ENST00000565008 1864 ntBASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 AL023284.2-201ENST00000405850 579 ntBASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CKAP2Q8WWK9 PCDH8P1-201ENST00000428983 2773 ntBASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 SLC29A4P1-201ENST00000398760 971 ntBASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 AC004951.3-201ENST00000418645 1148 ntBASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 PCDHA14-201ENST00000506751 2298 ntBASIC17.96■□□□□ 0.47
CKAP2Q8WWK9 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CKAP2Q8WWK9 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CKAP2Q8WWK9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms