Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 AC087289.5-201ENST00000586076 3175 ntBASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 KRT8P47-201ENST00000604727 1398 ntBASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 MTDHP3-201ENST00000594186 672 ntBASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SH3RF3Q8TEJ3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 AC007967.3-201ENST00000434308 558 ntBASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
SH3RF3Q8TEJ3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.02
SH3RF3Q8TEJ3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 AL022342.1-201ENST00000400363 863 ntBASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 AL096828.2-201ENST00000567259 1965 ntBASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
SH3RF3Q8TEJ3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 RBM17P3-201ENST00000417687 1192 ntBASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 KRT18P67-201ENST00000432816 1264 ntBASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 AC093677.2-201ENST00000600169 1863 ntBASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 AP005117.1-201ENST00000584346 1413 ntBASIC21.38■■□□□ 1.01
SH3RF3Q8TEJ3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms