Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL031598.1-201ENST00000561511 1773 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 PGM5P2-202ENST00000637225 1043 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 AC092865.6-201ENST00000642101 219 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 AC211486.1-202ENST00000416371 468 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 HCG4B-203ENST00000450128 991 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 AC211476.1-201ENST00000503899 468 ntBASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.93■□□□□ 0.3
COL27A1Q8IZC6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 AC126763.1-201ENST00000552015 2118 ntBASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 MTDHP5-201ENST00000598980 586 ntBASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COL27A1Q8IZC6 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 HTR5BP-201ENST00000430851 1154 ntBASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 PHGDH-209ENST00000641074 1780 ntBASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COL27A1Q8IZC6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 AC019129.2-201ENST00000609837 1235 ntBASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
COL27A1Q8IZC6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms