Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TUBA1AQ71U36 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TUBA1AQ71U36 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TUBA1AQ71U36 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TUBA1AQ71U36 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.73■□□□□ 0.27
TUBA1AQ71U36 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 KRT8P11-201ENST00000409686 1436 ntBASIC16.72■□□□□ 0.27
TUBA1AQ71U36 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.72■□□□□ 0.27
TUBA1AQ71U36 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TUBA1AQ71U36 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC008894.3-201ENST00000624324 3103 ntBASIC16.71■□□□□ 0.27
TUBA1AQ71U36 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 TSPY23P-201ENST00000440136 739 ntBASIC16.71■□□□□ 0.27
TUBA1AQ71U36 MFAP1P1-201ENST00000442257 1255 ntBASIC16.71■□□□□ 0.27
TUBA1AQ71U36 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 DGCR10-201ENST00000609839 495 ntBASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC073912.3-201ENST00000624414 853 ntBASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TUBA1AQ71U36 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.71■□□□□ 0.26
TUBA1AQ71U36 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.71■□□□□ 0.26
TUBA1AQ71U36 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.71■□□□□ 0.26
TUBA1AQ71U36 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 AC093677.2-201ENST00000600169 1863 ntBASIC16.7■□□□□ 0.26
TUBA1AQ71U36 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 MMP23A-201ENST00000234610 1017 ntBASIC16.7■□□□□ 0.26
TUBA1AQ71U36 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 AC087499.1-201ENST00000418141 1075 ntBASIC16.7■□□□□ 0.26
TUBA1AQ71U36 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TUBA1AQ71U36 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.7■□□□□ 0.26
TUBA1AQ71U36 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms