Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 MCCD1P2-201ENST00000423228 335 ntBASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 YBX1P5-201ENST00000509441 847 ntBASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 TCAP-202ENST00000578283 583 ntTSL 5 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
CDC42BPAQ5VT25 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPAQ5VT25 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
CDC42BPAQ5VT25 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 AC018845.2-201ENST00000568326 409 ntBASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 PHGDH-209ENST00000641074 1780 ntBASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
CDC42BPAQ5VT25 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 AC073592.5-201ENST00000624854 528 ntBASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 AC006504.4-201ENST00000592118 1568 ntBASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 METTL21AP1-201ENST00000438852 635 ntBASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 PRYP5-201ENST00000451909 266 ntBASIC27.19■■□□□ 1.94
CDC42BPAQ5VT25 SP100-208ENST00000427101 1922 ntTSL 2 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 ARTN-206ENST00000472435 402 ntTSL 3 BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 AC019129.2-201ENST00000609837 1235 ntBASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CDC42BPAQ5VT25 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 TBC1D3P5-201ENST00000579401 1545 ntBASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 COX5A-206ENST00000568783 571 ntTSL 3 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
CDC42BPAQ5VT25 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 AC132938.5-201ENST00000624980 1813 ntBASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 MED29-202ENST00000594368 1471 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC27.16■■□□□ 1.94
CDC42BPAQ5VT25 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms