Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC112907.3-201ENST00000577781 2400 ntBASIC17.45■□□□□ 0.38
RIF1Q5UIP0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RIF1Q5UIP0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 KRT18P32-201ENST00000424695 1287 ntBASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AC140878.1-201ENST00000565277 250 ntBASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 CU639417.3-201ENST00000624240 1404 ntBASIC17.44■□□□□ 0.38
RIF1Q5UIP0 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RIF1Q5UIP0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 PIN1P1-201ENST00000412108 996 ntBASIC17.43■□□□□ 0.38
RIF1Q5UIP0 HILS1-202ENST00000545329 423 ntBASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AL132655.2-201ENST00000596276 594 ntBASIC17.43■□□□□ 0.38
RIF1Q5UIP0 NCF1C-201ENST00000438382 1427 ntBASIC17.43■□□□□ 0.38
RIF1Q5UIP0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RIF1Q5UIP0 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AC004945.1-201ENST00000416738 983 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 COX5BP8-201ENST00000416911 349 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 RPS2P32-201ENST00000439199 892 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 AL024508.2-201ENST00000607749 1894 ntBASIC17.42■□□□□ 0.38
RIF1Q5UIP0 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RIF1Q5UIP0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms