Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5Q00535 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5Q00535 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDK5Q00535 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.32■□□□□ 0.2
CDK5Q00535 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.32■□□□□ 0.2
CDK5Q00535 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CDK5Q00535 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK5Q00535 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.32■□□□□ 0.2
CDK5Q00535 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.32■□□□□ 0.2
CDK5Q00535 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CDK5Q00535 AL353719.1-201ENST00000566847 864 ntBASIC16.32■□□□□ 0.2
CDK5Q00535 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.32■□□□□ 0.2
CDK5Q00535 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.32■□□□□ 0.2
CDK5Q00535 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDK5Q00535 AC084018.2-201ENST00000613093 2607 ntBASIC16.32■□□□□ 0.2
CDK5Q00535 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.31■□□□□ 0.2
CDK5Q00535 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 AP005242.2-201ENST00000580065 1175 ntBASIC16.31■□□□□ 0.2
CDK5Q00535 REXO1L10P-201ENST00000615707 1290 ntBASIC16.31■□□□□ 0.2
CDK5Q00535 REXO1L12P-201ENST00000622156 912 ntBASIC16.31■□□□□ 0.2
CDK5Q00535 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 AC124067.4-201ENST00000519691 2379 ntBASIC16.31■□□□□ 0.2
CDK5Q00535 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CDK5Q00535 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDK5Q00535 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 CROCCP2-202ENST00000412962 2773 ntBASIC16.31■□□□□ 0.2
CDK5Q00535 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.31■□□□□ 0.2
CDK5Q00535 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
CDK5Q00535 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK5Q00535 AL121761.2-201ENST00000598007 1648 ntBASIC16.3■□□□□ 0.2
CDK5Q00535 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CDK5Q00535 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CDK5Q00535 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.3■□□□□ 0.2
CDK5Q00535 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.3■□□□□ 0.2
CDK5Q00535 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.3■□□□□ 0.2
CDK5Q00535 MIR4651-201ENST00000582622 73 ntBASIC16.3■□□□□ 0.2
CDK5Q00535 AC112497.1-201ENST00000624824 639 ntBASIC16.3■□□□□ 0.2
CDK5Q00535 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.3■□□□□ 0.2
CDK5Q00535 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.3■□□□□ 0.2
CDK5Q00535 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
CDK5Q00535 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CDK5Q00535 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CDK5Q00535 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms