Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.33■□□□□ 0.36
CLDN6P56747 AC113404.2-201ENST00000507884 177 ntBASIC17.33■□□□□ 0.36
CLDN6P56747 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN6P56747 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.33■□□□□ 0.36
CLDN6P56747 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN6P56747 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.33■□□□□ 0.36
CLDN6P56747 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN6P56747 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN6P56747 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 AC134684.3-201ENST00000641758 218 ntBASIC17.33■□□□□ 0.36
CLDN6P56747 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CLDN6P56747 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CLDN6P56747 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN6P56747 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CLDN6P56747 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN6P56747 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.32■□□□□ 0.36
CLDN6P56747 UNC93B6-202ENST00000528242 690 ntBASIC17.32■□□□□ 0.36
CLDN6P56747 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
CLDN6P56747 NKAPP1-205ENST00000585790 367 ntBASIC17.32■□□□□ 0.36
CLDN6P56747 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN6P56747 AC087289.5-201ENST00000586076 3175 ntBASIC17.32■□□□□ 0.36
CLDN6P56747 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLDN6P56747 AC005082.1-201ENST00000413042 2259 ntBASIC17.31■□□□□ 0.36
CLDN6P56747 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN6P56747 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN6P56747 AL499627.1-201ENST00000569373 2188 ntBASIC17.31■□□□□ 0.36
CLDN6P56747 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN6P56747 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.31■□□□□ 0.36
CLDN6P56747 AC004967.1-201ENST00000453589 447 ntBASIC17.31■□□□□ 0.36
CLDN6P56747 KRT18P41-201ENST00000518924 1277 ntBASIC17.31■□□□□ 0.36
CLDN6P56747 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.31■□□□□ 0.36
CLDN6P56747 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CLDN6P56747 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLDN6P56747 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLDN6P56747 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.31■□□□□ 0.36
CLDN6P56747 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CLDN6P56747 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN6P56747 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLDN6P56747 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN6P56747 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN6P56747 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CLDN6P56747 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN6P56747 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN6P56747 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.3■□□□□ 0.36
CLDN6P56747 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN6P56747 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.3■□□□□ 0.36
CLDN6P56747 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.3■□□□□ 0.36
CLDN6P56747 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLDN6P56747 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLDN6P56747 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms