Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.53□□□□□ -0.08
PAX9P55771 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PAX9P55771 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 AC239809.2-201ENST00000415381 517 ntBASIC14.53□□□□□ -0.08
PAX9P55771 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.53□□□□□ -0.08
PAX9P55771 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.53□□□□□ -0.08
PAX9P55771 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
PAX9P55771 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PAX9P55771 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PAX9P55771 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
PAX9P55771 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC14.53□□□□□ -0.08
PAX9P55771 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.53□□□□□ -0.08
PAX9P55771 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PAX9P55771 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PAX9P55771 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.52□□□□□ -0.08
PAX9P55771 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.52□□□□□ -0.08
PAX9P55771 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.08
PAX9P55771 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PAX9P55771 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PAX9P55771 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PAX9P55771 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.52□□□□□ -0.08
PAX9P55771 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.52□□□□□ -0.08
PAX9P55771 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.52□□□□□ -0.08
PAX9P55771 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PAX9P55771 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
PAX9P55771 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.52□□□□□ -0.08
PAX9P55771 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PAX9P55771 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 GAS7-202ENST00000396115 929 ntTSL 5 BASIC14.52□□□□□ -0.09
PAX9P55771 AC011506.1-201ENST00000474329 610 ntBASIC14.52□□□□□ -0.09
PAX9P55771 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
PAX9P55771 DUTP2-201ENST00000519164 463 ntBASIC14.52□□□□□ -0.09
PAX9P55771 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PAX9P55771 NAT14-202ENST00000587400 416 ntTSL 5 BASIC14.52□□□□□ -0.09
PAX9P55771 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PAX9P55771 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 AC100803.2-201ENST00000562459 1963 ntBASIC14.52□□□□□ -0.09
PAX9P55771 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PAX9P55771 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.52□□□□□ -0.09
PAX9P55771 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
PAX9P55771 UBALD1-205ENST00000590891 2641 ntBASIC14.52□□□□□ -0.09
PAX9P55771 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PAX9P55771 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PAX9P55771 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.52□□□□□ -0.09
PAX9P55771 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PAX9P55771 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.51□□□□□ -0.09
PAX9P55771 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
PAX9P55771 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.51□□□□□ -0.09
PAX9P55771 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC14.51□□□□□ -0.09
PAX9P55771 AP002982.1-201ENST00000492365 877 ntBASIC14.51□□□□□ -0.09
PAX9P55771 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.51□□□□□ -0.09
PAX9P55771 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PAX9P55771 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PAX9P55771 AC026271.3-201ENST00000571884 352 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms