Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.77□□□□□ -0.05
CEACAM3P40198 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.77□□□□□ -0.05
CEACAM3P40198 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CEACAM3P40198 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.77□□□□□ -0.05
CEACAM3P40198 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CEACAM3P40198 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CEACAM3P40198 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
CEACAM3P40198 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 AL024508.2-201ENST00000607749 1894 ntBASIC14.76□□□□□ -0.05
CEACAM3P40198 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 MIR1224-201ENST00000408193 85 ntBASIC14.76□□□□□ -0.05
CEACAM3P40198 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.76□□□□□ -0.05
CEACAM3P40198 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC14.76□□□□□ -0.05
CEACAM3P40198 AC092597.1-201ENST00000487352 616 ntBASIC14.76□□□□□ -0.05
CEACAM3P40198 PPOX-214ENST00000535223 664 ntTSL 3 BASIC14.76□□□□□ -0.05
CEACAM3P40198 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.76□□□□□ -0.05
CEACAM3P40198 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 AC079602.3-201ENST00000623931 403 ntBASIC14.76□□□□□ -0.05
CEACAM3P40198 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.76□□□□□ -0.05
CEACAM3P40198 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CEACAM3P40198 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CEACAM3P40198 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.76□□□□□ -0.05
CEACAM3P40198 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 GUK1-204ENST00000366721 689 ntTSL 3 BASIC14.75□□□□□ -0.05
CEACAM3P40198 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.75□□□□□ -0.05
CEACAM3P40198 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 VENTXP5-201ENST00000523979 775 ntBASIC14.75□□□□□ -0.05
CEACAM3P40198 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CEACAM3P40198 AC010331.1-201ENST00000611423 582 ntBASIC14.75□□□□□ -0.05
CEACAM3P40198 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CEACAM3P40198 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.75□□□□□ -0.05
CEACAM3P40198 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.75□□□□□ -0.05
CEACAM3P40198 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CEACAM3P40198 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms