Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 METTL21AP1-201ENST00000438852 635 ntBASIC31.47■■■□□ 2.63
TOP2AP11388 COX5A-202ENST00000562233 441 ntTSL 3 BASIC31.47■■■□□ 2.63
TOP2AP11388 TCAP-202ENST00000578283 583 ntTSL 5 BASIC31.47■■■□□ 2.63
TOP2AP11388 AC019129.2-201ENST00000609837 1235 ntBASIC31.47■■■□□ 2.63
TOP2AP11388 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC31.47■■■□□ 2.63
TOP2AP11388 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC31.47■■■□□ 2.63
TOP2AP11388 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TOP2AP11388 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOP2AP11388 AC211486.1-202ENST00000416371 468 ntBASIC31.46■■■□□ 2.63
TOP2AP11388 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC31.46■■■□□ 2.63
TOP2AP11388 AC211476.1-201ENST00000503899 468 ntBASIC31.46■■■□□ 2.63
TOP2AP11388 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
TOP2AP11388 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC31.46■■■□□ 2.63
TOP2AP11388 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TOP2AP11388 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
TOP2AP11388 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TOP2AP11388 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
TOP2AP11388 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
TOP2AP11388 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
TOP2AP11388 IGLL3P-201ENST00000412472 434 ntBASIC31.45■■■□□ 2.63
TOP2AP11388 HCG4B-203ENST00000450128 991 ntBASIC31.45■■■□□ 2.63
TOP2AP11388 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC31.45■■■□□ 2.63
TOP2AP11388 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
TOP2AP11388 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC31.45■■■□□ 2.63
TOP2AP11388 AL031598.1-201ENST00000561511 1773 ntBASIC31.45■■■□□ 2.63
TOP2AP11388 AC022898.2-201ENST00000616822 1312 ntBASIC31.45■■■□□ 2.62
TOP2AP11388 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TOP2AP11388 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC31.45■■■□□ 2.62
TOP2AP11388 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
TOP2AP11388 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC31.45■■■□□ 2.62
TOP2AP11388 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
TOP2AP11388 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC31.44■■■□□ 2.62
TOP2AP11388 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TOP2AP11388 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC31.43■■■□□ 2.62
TOP2AP11388 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC31.43■■■□□ 2.62
TOP2AP11388 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC31.43■■■□□ 2.62
TOP2AP11388 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC31.43■■■□□ 2.62
TOP2AP11388 AL805961.1-202ENST00000641562 540 ntBASIC31.43■■■□□ 2.62
TOP2AP11388 AC092865.6-201ENST00000642101 219 ntBASIC31.43■■■□□ 2.62
TOP2AP11388 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
TOP2AP11388 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
TOP2AP11388 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC31.42■■■□□ 2.62
TOP2AP11388 AC018845.2-201ENST00000568326 409 ntBASIC31.42■■■□□ 2.62
TOP2AP11388 AC008667.4-201ENST00000607370 168 ntBASIC31.42■■■□□ 2.62
TOP2AP11388 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC31.42■■■□□ 2.62
TOP2AP11388 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC31.42■■■□□ 2.62
TOP2AP11388 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
TOP2AP11388 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC31.42■■■□□ 2.62
TOP2AP11388 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
TOP2AP11388 MED29-202ENST00000594368 1471 ntTSL 2 BASIC31.42■■■□□ 2.62
TOP2AP11388 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC31.42■■■□□ 2.62
TOP2AP11388 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
TOP2AP11388 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC31.41■■■□□ 2.62
TOP2AP11388 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
TOP2AP11388 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC31.41■■■□□ 2.62
TOP2AP11388 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 PON3-205ENST00000451904 1053 ntTSL 3 BASIC31.41■■■□□ 2.62
TOP2AP11388 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC31.41■■■□□ 2.62
TOP2AP11388 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
TOP2AP11388 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC31.41■■■□□ 2.62
TOP2AP11388 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 AL513190.1-201ENST00000621254 727 ntBASIC31.41■■■□□ 2.62
TOP2AP11388 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC31.41■■■□□ 2.62
TOP2AP11388 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 PHGDH-209ENST00000641074 1780 ntBASIC31.41■■■□□ 2.62
TOP2AP11388 AC116562.4-201ENST00000641316 2276 ntBASIC31.41■■■□□ 2.62
TOP2AP11388 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
TOP2AP11388 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC31.4■■■□□ 2.62
TOP2AP11388 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TOP2AP11388 AL020989.1-201ENST00000422979 469 ntBASIC31.4■■■□□ 2.62
TOP2AP11388 AC103564.2-201ENST00000432853 1299 ntBASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms