Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 CRCP-205ENST00000431089 942 ntTSL 2 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 COX5A-202ENST00000562233 441 ntTSL 3 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 AC005082.1-201ENST00000413042 2259 ntBASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC23.91■■□□□ 1.42
CSB-PGBD3P0DP91 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 AC004832.2-201ENST00000426397 482 ntBASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CSB-PGBD3P0DP91 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
CSB-PGBD3P0DP91 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 AC007967.3-201ENST00000434308 558 ntBASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 MIR1199-201ENST00000621445 119 ntBASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC23.89■■□□□ 1.41
CSB-PGBD3P0DP91 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 KIRREL3-AS3-201ENST00000404882 831 ntBASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 AL022326.1-202ENST00000641533 845 ntBASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CSB-PGBD3P0DP91 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 SDCCAG3P1-201ENST00000589292 1150 ntBASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 TBC1D3P5-201ENST00000579401 1545 ntBASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
CSB-PGBD3P0DP91 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms