Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RHOP08100 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.69■□□□□ 0.58
RHOP08100 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.69■□□□□ 0.58
RHOP08100 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 MIR1233-2-201ENST00000408138 82 ntBASIC18.68■□□□□ 0.58
RHOP08100 MIR1233-1-201ENST00000408722 82 ntBASIC18.68■□□□□ 0.58
RHOP08100 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.68■□□□□ 0.58
RHOP08100 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.68■□□□□ 0.58
RHOP08100 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.68■□□□□ 0.58
RHOP08100 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.68■□□□□ 0.58
RHOP08100 MTDHP4-201ENST00000600287 670 ntBASIC18.68■□□□□ 0.58
RHOP08100 AC008735.5-201ENST00000623544 497 ntBASIC18.68■□□□□ 0.58
RHOP08100 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
RHOP08100 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.68■□□□□ 0.58
RHOP08100 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 AC097374.2-201ENST00000618617 1306 ntBASIC18.68■□□□□ 0.58
RHOP08100 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.68■□□□□ 0.58
RHOP08100 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RHOP08100 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RHOP08100 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.67■□□□□ 0.58
RHOP08100 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.67■□□□□ 0.58
RHOP08100 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.67■□□□□ 0.58
RHOP08100 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
RHOP08100 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.67■□□□□ 0.58
RHOP08100 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.67■□□□□ 0.58
RHOP08100 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.67■□□□□ 0.58
RHOP08100 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.67■□□□□ 0.58
RHOP08100 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.67■□□□□ 0.58
RHOP08100 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.67■□□□□ 0.58
RHOP08100 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.67■□□□□ 0.58
RHOP08100 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RHOP08100 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOP08100 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOP08100 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.66■□□□□ 0.58
RHOP08100 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOP08100 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOP08100 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RHOP08100 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOP08100 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOP08100 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.66■□□□□ 0.58
RHOP08100 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.66■□□□□ 0.58
RHOP08100 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.66■□□□□ 0.58
RHOP08100 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.66■□□□□ 0.58
RHOP08100 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.66■□□□□ 0.58
RHOP08100 AC027601.4-201ENST00000611259 610 ntBASIC18.66■□□□□ 0.58
RHOP08100 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOP08100 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
RHOP08100 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RHOP08100 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RHOP08100 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 AC126763.1-201ENST00000552015 2118 ntBASIC18.65■□□□□ 0.58
RHOP08100 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHOP08100 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
RHOP08100 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RHOP08100 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RHOP08100 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
RHOP08100 RNA5SP415-201ENST00000517246 115 ntBASIC18.65■□□□□ 0.58
RHOP08100 PGAM5P1-201ENST00000518923 814 ntBASIC18.65■□□□□ 0.58
RHOP08100 AC034105.1-201ENST00000563488 319 ntBASIC18.65■□□□□ 0.58
RHOP08100 AC140113.2-201ENST00000604370 208 ntBASIC18.65■□□□□ 0.58
RHOP08100 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms