Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 AL353807.1-201ENST00000427475 662 ntBASIC18.31■□□□□ 0.52
CDH16O75309 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH16O75309 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.31■□□□□ 0.52
CDH16O75309 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.31■□□□□ 0.52
CDH16O75309 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
CDH16O75309 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
CDH16O75309 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDH16O75309 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH16O75309 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.3■□□□□ 0.52
CDH16O75309 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH16O75309 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CDH16O75309 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 AC006058.3-201ENST00000606217 1069 ntBASIC18.3■□□□□ 0.52
CDH16O75309 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CDH16O75309 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.3■□□□□ 0.52
CDH16O75309 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 AC133963.1-201ENST00000504166 1679 ntBASIC18.3■□□□□ 0.52
CDH16O75309 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
CDH16O75309 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.3■□□□□ 0.52
CDH16O75309 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 AC036111.1-201ENST00000533973 1582 ntBASIC18.3■□□□□ 0.52
CDH16O75309 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDH16O75309 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.3■□□□□ 0.52
CDH16O75309 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CDH16O75309 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.29■□□□□ 0.52
CDH16O75309 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.29■□□□□ 0.52
CDH16O75309 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.29■□□□□ 0.52
CDH16O75309 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 AC011506.1-201ENST00000474329 610 ntBASIC18.29■□□□□ 0.52
CDH16O75309 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.29■□□□□ 0.52
CDH16O75309 MIR3180-5-201ENST00000583743 153 ntBASIC18.29■□□□□ 0.52
CDH16O75309 CR392000.1-201ENST00000624770 1228 ntBASIC18.29■□□□□ 0.52
CDH16O75309 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CDH16O75309 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CDH16O75309 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.29■□□□□ 0.52
CDH16O75309 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDH16O75309 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 TNRC18P3-201ENST00000441896 2691 ntBASIC18.28■□□□□ 0.52
CDH16O75309 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CDH16O75309 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 LINC01126-201ENST00000623515 1646 ntBASIC18.28■□□□□ 0.52
CDH16O75309 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CDH16O75309 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CDH16O75309 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDH16O75309 B3GAT3P1-201ENST00000471720 806 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms