Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA12O60330 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA12O60330 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 FAM197Y8-203ENST00000450145 560 ntBASIC17.93■□□□□ 0.46
PCDHGA12O60330 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 AF228730.7-201ENST00000641842 219 ntBASIC17.93■□□□□ 0.46
PCDHGA12O60330 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA12O60330 IL9RP2-201ENST00000423948 1312 ntBASIC17.93■□□□□ 0.46
PCDHGA12O60330 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 HCG11-201ENST00000411553 5696 ntBASIC17.93■□□□□ 0.46
PCDHGA12O60330 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA12O60330 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 Z98044.1-201ENST00000632503 1764 ntBASIC17.92■□□□□ 0.46
PCDHGA12O60330 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 MIR574-201ENST00000385209 96 ntBASIC17.92■□□□□ 0.46
PCDHGA12O60330 KRT18P67-201ENST00000432816 1264 ntBASIC17.92■□□□□ 0.46
PCDHGA12O60330 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 BNIP3P18-201ENST00000593976 575 ntBASIC17.92■□□□□ 0.46
PCDHGA12O60330 AL591684.3-201ENST00000605187 298 ntBASIC17.92■□□□□ 0.46
PCDHGA12O60330 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA12O60330 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA12O60330 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 AF186996.4-201ENST00000467186 377 ntBASIC17.91■□□□□ 0.46
PCDHGA12O60330 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 MIR5100-201ENST00000579544 119 ntBASIC17.91■□□□□ 0.46
PCDHGA12O60330 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA12O60330 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA12O60330 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms