Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDH7O60245 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDH7O60245 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PCDH7O60245 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH7O60245 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
PCDH7O60245 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.3■□□□□ 0.36
PCDH7O60245 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PCDH7O60245 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDH7O60245 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PCDH7O60245 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDH7O60245 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDH7O60245 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDH7O60245 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH7O60245 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH7O60245 LIN28AP1-201ENST00000429574 405 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 PVRIG2P-201ENST00000435460 978 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 ATP5G1P1-201ENST00000448724 379 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 GCSHP2-201ENST00000560971 527 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 AC008687.5-201ENST00000593746 558 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
PCDH7O60245 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PCDH7O60245 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PCDH7O60245 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
PCDH7O60245 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PCDH7O60245 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PCDH7O60245 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PCDH7O60245 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PCDH7O60245 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PCDH7O60245 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms