Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.03■□□□□ 0.16
SGCEO43556 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.03■□□□□ 0.16
SGCEO43556 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.03■□□□□ 0.16
SGCEO43556 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.03■□□□□ 0.16
SGCEO43556 AC005363.2-201ENST00000618631 242 ntBASIC16.03■□□□□ 0.16
SGCEO43556 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.03■□□□□ 0.16
SGCEO43556 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 AC139713.2-201ENST00000641328 2723 ntBASIC16.03■□□□□ 0.16
SGCEO43556 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SGCEO43556 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SGCEO43556 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SGCEO43556 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.03■□□□□ 0.16
SGCEO43556 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.03■□□□□ 0.16
SGCEO43556 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.03■□□□□ 0.16
SGCEO43556 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.03■□□□□ 0.16
SGCEO43556 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SGCEO43556 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SGCEO43556 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SGCEO43556 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SGCEO43556 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.02■□□□□ 0.16
SGCEO43556 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.02■□□□□ 0.16
SGCEO43556 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.02■□□□□ 0.16
SGCEO43556 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.02■□□□□ 0.16
SGCEO43556 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.02■□□□□ 0.16
SGCEO43556 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SGCEO43556 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.02■□□□□ 0.16
SGCEO43556 AL138966.2-201ENST00000621997 464 ntBASIC16.02■□□□□ 0.16
SGCEO43556 AC097493.4-201ENST00000641197 219 ntBASIC16.02■□□□□ 0.16
SGCEO43556 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.02■□□□□ 0.16
SGCEO43556 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SGCEO43556 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SGCEO43556 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SGCEO43556 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SGCEO43556 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
SGCEO43556 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SGCEO43556 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SGCEO43556 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.02■□□□□ 0.15
SGCEO43556 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SGCEO43556 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SGCEO43556 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.15
SGCEO43556 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SGCEO43556 FER1L4-210ENST00000615531 5998 ntBASIC16.01■□□□□ 0.15
SGCEO43556 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.01■□□□□ 0.15
SGCEO43556 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SGCEO43556 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 AC113347.1-201ENST00000413321 391 ntBASIC16.01■□□□□ 0.15
SGCEO43556 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 AC010203.1-204ENST00000548782 407 ntBASIC16.01■□□□□ 0.15
SGCEO43556 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.01■□□□□ 0.15
SGCEO43556 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.01■□□□□ 0.15
SGCEO43556 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.01■□□□□ 0.15
SGCEO43556 AC012306.2-201ENST00000609350 630 ntBASIC16.01■□□□□ 0.15
SGCEO43556 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.01■□□□□ 0.15
SGCEO43556 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SGCEO43556 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms