Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 AC006116.8-202ENST00000587620 1550 ntBASIC17.18■□□□□ 0.34
UPK1AO00322 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK1AO00322 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1AO00322 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UPK1AO00322 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPK1AO00322 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPK1AO00322 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPK1AO00322 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 GMCL1P1-201ENST00000463439 1581 ntBASIC17.17■□□□□ 0.34
UPK1AO00322 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.17■□□□□ 0.34
UPK1AO00322 AL138966.2-201ENST00000621997 464 ntBASIC17.17■□□□□ 0.34
UPK1AO00322 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UPK1AO00322 AC097493.4-201ENST00000641197 219 ntBASIC17.17■□□□□ 0.34
UPK1AO00322 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1AO00322 AL096828.2-201ENST00000567259 1965 ntBASIC17.17■□□□□ 0.34
UPK1AO00322 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1AO00322 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
UPK1AO00322 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
UPK1AO00322 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.16■□□□□ 0.34
UPK1AO00322 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.16■□□□□ 0.34
UPK1AO00322 AC010240.3-201ENST00000607688 395 ntBASIC17.16■□□□□ 0.34
UPK1AO00322 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
UPK1AO00322 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 AC141257.4-201ENST00000634557 245 ntBASIC17.16■□□□□ 0.34
UPK1AO00322 AC136944.6-201ENST00000634818 245 ntBASIC17.16■□□□□ 0.34
UPK1AO00322 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1AO00322 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
UPK1AO00322 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1AO00322 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1AO00322 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UPK1AO00322 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1AO00322 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.15■□□□□ 0.34
UPK1AO00322 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
UPK1AO00322 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
UPK1AO00322 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.15■□□□□ 0.34
UPK1AO00322 AC010203.1-204ENST00000548782 407 ntBASIC17.15■□□□□ 0.34
UPK1AO00322 AC009065.1-201ENST00000564055 1225 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms