Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TMEM88BA6NKF7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 AP002414.1-201ENST00000391405 1147 ntBASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 FAM207CP-201ENST00000443486 507 ntBASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 AC073592.5-201ENST00000624854 528 ntBASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
TMEM88BA6NKF7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 CR383656.12-201ENST00000549567 513 ntBASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AC009093.7-201ENST00000623853 1223 ntBASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEM88BA6NKF7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.89■□□□□ 0.94
TMEM88BA6NKF7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM88BA6NKF7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEM88BA6NKF7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 LINC02560-201ENST00000596379 459 ntBASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 AC008761.3-201ENST00000624803 892 ntBASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
TMEM88BA6NKF7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 AC092667.1-201ENST00000434301 2586 ntBASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 CNN2P2-201ENST00000443536 909 ntBASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 CNN2P3-201ENST00000450201 906 ntBASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 UGT1A2P-201ENST00000454886 866 ntBASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 AL136317.3-201ENST00000618497 906 ntBASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.88■□□□□ 0.93
TMEM88BA6NKF7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms