Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 AC092338.2-201ENST00000568827 1415 ntBASIC19.24■□□□□ 0.67
RCCD1A6NED2 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RCCD1A6NED2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RCCD1A6NED2 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 TSPY20P-201ENST00000450910 630 ntBASIC19.23■□□□□ 0.67
RCCD1A6NED2 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 AC112497.1-201ENST00000624824 639 ntBASIC19.23■□□□□ 0.67
RCCD1A6NED2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.23■□□□□ 0.67
RCCD1A6NED2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RCCD1A6NED2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 LINC00304-203ENST00000565008 1864 ntBASIC19.22■□□□□ 0.67
RCCD1A6NED2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 AC026471.5-201ENST00000615068 467 ntBASIC19.22■□□□□ 0.67
RCCD1A6NED2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 AL138688.1-201ENST00000624851 1594 ntBASIC19.22■□□□□ 0.67
RCCD1A6NED2 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 TNRC18P3-201ENST00000441896 2691 ntBASIC19.22■□□□□ 0.67
RCCD1A6NED2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RCCD1A6NED2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RCCD1A6NED2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 KRT18P29-201ENST00000397031 1267 ntBASIC19.21■□□□□ 0.67
RCCD1A6NED2 AC012618.2-201ENST00000428058 849 ntBASIC19.21■□□□□ 0.67
RCCD1A6NED2 SLC25A1P2-201ENST00000430693 912 ntBASIC19.21■□□□□ 0.67
RCCD1A6NED2 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 AC142381.4-202ENST00000563973 229 ntBASIC19.21■□□□□ 0.67
RCCD1A6NED2 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RCCD1A6NED2 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.21■□□□□ 0.67
RCCD1A6NED2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
RCCD1A6NED2 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms