Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AC010203.1-204ENST00000548782 407 ntBASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 GCSHP2-201ENST00000560971 527 ntBASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AL512604.3-201ENST00000569583 964 ntBASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AL023973.1-201ENST00000624619 620 ntBASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRIM49BA6NDI0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 AC092865.7-201ENST00000641832 219 ntBASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.95■□□□□ 0.78
TRIM49BA6NDI0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 LINC00167-201ENST00000530583 1419 ntBASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SLC25A3P1-201ENST00000443844 931 ntBASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRIM49BA6NDI0 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 PVRIG2P-201ENST00000435460 978 ntBASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
TRIM49BA6NDI0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms