Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim39Q9ESN2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim39Q9ESN2 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.75■□□□□ 0.91
Trim39Q9ESN2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim39Q9ESN2 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim39Q9ESN2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
Trim39Q9ESN2 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim39Q9ESN2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.74■□□□□ 0.91
Trim39Q9ESN2 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trim39Q9ESN2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim39Q9ESN2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.74■□□□□ 0.91
Trim39Q9ESN2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim39Q9ESN2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Gm7432-201ENSMUST00000210343 879 ntBASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trim39Q9ESN2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trim39Q9ESN2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trim39Q9ESN2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim39Q9ESN2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.69■□□□□ 0.9
Trim39Q9ESN2 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim39Q9ESN2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim39Q9ESN2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim39Q9ESN2 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim39Q9ESN2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim39Q9ESN2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim39Q9ESN2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim39Q9ESN2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim39Q9ESN2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim39Q9ESN2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim39Q9ESN2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim39Q9ESN2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim39Q9ESN2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
Trim39Q9ESN2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim39Q9ESN2 Gm11599-201ENSMUST00000118720 878 ntBASIC20.64■□□□□ 0.89
Trim39Q9ESN2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim39Q9ESN2 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Trim39Q9ESN2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim39Q9ESN2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Trim39Q9ESN2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.63■□□□□ 0.89
Trim39Q9ESN2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim39Q9ESN2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim39Q9ESN2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trim39Q9ESN2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim39Q9ESN2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.6■□□□□ 0.89
Trim39Q9ESN2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trim39Q9ESN2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim39Q9ESN2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim39Q9ESN2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim39Q9ESN2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim39Q9ESN2 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim39Q9ESN2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim39Q9ESN2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim39Q9ESN2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim39Q9ESN2 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trim39Q9ESN2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms