Protein–RNA interactions for Protein: Q9CQC5

Cdc42ep3, Cdc42 effector protein 3, mousemouse

Predictions only

Length 254 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc42ep3Q9CQC5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdc42ep3Q9CQC5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdc42ep3Q9CQC5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.89■□□□□ 0.94
Cdc42ep3Q9CQC5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.89■□□□□ 0.94
Cdc42ep3Q9CQC5 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdc42ep3Q9CQC5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdc42ep3Q9CQC5 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdc42ep3Q9CQC5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdc42ep3Q9CQC5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdc42ep3Q9CQC5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.83■□□□□ 0.93
Cdc42ep3Q9CQC5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdc42ep3Q9CQC5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cdc42ep3Q9CQC5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cdc42ep3Q9CQC5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdc42ep3Q9CQC5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdc42ep3Q9CQC5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdc42ep3Q9CQC5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.77■□□□□ 0.91
Cdc42ep3Q9CQC5 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdc42ep3Q9CQC5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm13241-201ENSMUST00000094493 780 ntBASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdc42ep3Q9CQC5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Cdc42ep3Q9CQC5 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdc42ep3Q9CQC5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.72■□□□□ 0.91
Cdc42ep3Q9CQC5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Cdc42ep3Q9CQC5 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdc42ep3Q9CQC5 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdc42ep3Q9CQC5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.68■□□□□ 0.9
Cdc42ep3Q9CQC5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms