Protein–RNA interactions for Protein: Q99J38

Ttc30a1, Tetratricopeptide repeat protein 30A1, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc30a1Q99J38 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ttc30a1Q99J38 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
Ttc30a1Q99J38 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC22.77■■□□□ 1.24
Ttc30a1Q99J38 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ttc30a1Q99J38 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ttc30a1Q99J38 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ttc30a1Q99J38 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.76■■□□□ 1.23
Ttc30a1Q99J38 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ttc30a1Q99J38 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ttc30a1Q99J38 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Ttc30a1Q99J38 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ttc30a1Q99J38 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ttc30a1Q99J38 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.74■■□□□ 1.23
Ttc30a1Q99J38 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Ttc30a1Q99J38 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC22.74■■□□□ 1.23
Ttc30a1Q99J38 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Ttc30a1Q99J38 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Ttc30a1Q99J38 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ttc30a1Q99J38 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ttc30a1Q99J38 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Ttc30a1Q99J38 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Gm45364-201ENSMUST00000210883 159 ntBASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ttc30a1Q99J38 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
Ttc30a1Q99J38 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc30a1Q99J38 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ttc30a1Q99J38 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ttc30a1Q99J38 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc30a1Q99J38 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.7■■□□□ 1.22
Ttc30a1Q99J38 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc30a1Q99J38 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc30a1Q99J38 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ttc30a1Q99J38 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ttc30a1Q99J38 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc30a1Q99J38 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc30a1Q99J38 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC22.68■■□□□ 1.22
Ttc30a1Q99J38 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ttc30a1Q99J38 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc30a1Q99J38 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.67■■□□□ 1.22
Ttc30a1Q99J38 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ttc30a1Q99J38 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc30a1Q99J38 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc30a1Q99J38 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Ttc30a1Q99J38 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc30a1Q99J38 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.65■■□□□ 1.22
Ttc30a1Q99J38 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc30a1Q99J38 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ttc30a1Q99J38 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Gm6311-201ENSMUST00000073790 878 ntBASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Ttc30a1Q99J38 Terc-201ENSMUST00000082862 423 ntBASIC22.63■■□□□ 1.21
Ttc30a1Q99J38 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Ttc30a1Q99J38 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.63■■□□□ 1.21
Ttc30a1Q99J38 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Ttc30a1Q99J38 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
Ttc30a1Q99J38 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC22.61■■□□□ 1.21
Ttc30a1Q99J38 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc30a1Q99J38 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc30a1Q99J38 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc30a1Q99J38 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ttc30a1Q99J38 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ttc30a1Q99J38 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc30a1Q99J38 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc30a1Q99J38 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ttc30a1Q99J38 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.59■■□□□ 1.21
Ttc30a1Q99J38 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ttc30a1Q99J38 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Ttc30a1Q99J38 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ttc30a1Q99J38 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc30a1Q99J38 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc30a1Q99J38 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc30a1Q99J38 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ttc30a1Q99J38 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ttc30a1Q99J38 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.55■■□□□ 1.2
Ttc30a1Q99J38 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms