Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Atp2a1Q8R429 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Atp2a1Q8R429 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Atp2a1Q8R429 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Atp2a1Q8R429 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Atp2a1Q8R429 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Atp2a1Q8R429 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Atp2a1Q8R429 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.27■■□□□ 1.64
Atp2a1Q8R429 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC25.27■■□□□ 1.64
Atp2a1Q8R429 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
Atp2a1Q8R429 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
Atp2a1Q8R429 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC25.25■■□□□ 1.63
Atp2a1Q8R429 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
Atp2a1Q8R429 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Atp2a1Q8R429 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Atp2a1Q8R429 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Atp2a1Q8R429 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.24■■□□□ 1.63
Atp2a1Q8R429 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Atp2a1Q8R429 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
Atp2a1Q8R429 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Atp2a1Q8R429 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Atp2a1Q8R429 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Atp2a1Q8R429 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC25.22■■□□□ 1.63
Atp2a1Q8R429 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Atp2a1Q8R429 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
Atp2a1Q8R429 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
Atp2a1Q8R429 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC25.2■■□□□ 1.63
Atp2a1Q8R429 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC25.2■■□□□ 1.62
Atp2a1Q8R429 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
Atp2a1Q8R429 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Atp2a1Q8R429 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Atp2a1Q8R429 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Atp2a1Q8R429 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Atp2a1Q8R429 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
Atp2a1Q8R429 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
Atp2a1Q8R429 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
Atp2a1Q8R429 Gm5921-201ENSMUST00000075898 882 ntBASIC25.17■■□□□ 1.62
Atp2a1Q8R429 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Atp2a1Q8R429 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
Atp2a1Q8R429 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.16■■□□□ 1.62
Atp2a1Q8R429 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Atp2a1Q8R429 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.16■■□□□ 1.62
Atp2a1Q8R429 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Atp2a1Q8R429 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
Atp2a1Q8R429 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC25.15■■□□□ 1.62
Atp2a1Q8R429 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Atp2a1Q8R429 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Atp2a1Q8R429 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC25.13■■□□□ 1.61
Atp2a1Q8R429 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Atp2a1Q8R429 AC122428.3-201ENSMUST00000215551 2290 ntBASIC25.12■■□□□ 1.61
Atp2a1Q8R429 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Atp2a1Q8R429 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
Atp2a1Q8R429 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Atp2a1Q8R429 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Atp2a1Q8R429 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Atp2a1Q8R429 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Atp2a1Q8R429 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Atp2a1Q8R429 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Atp2a1Q8R429 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC25.09■■□□□ 1.61
Atp2a1Q8R429 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Atp2a1Q8R429 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Atp2a1Q8R429 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Atp2a1Q8R429 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Atp2a1Q8R429 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Atp2a1Q8R429 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
Atp2a1Q8R429 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Atp2a1Q8R429 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atp2a1Q8R429 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atp2a1Q8R429 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Atp2a1Q8R429 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Atp2a1Q8R429 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atp2a1Q8R429 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Atp2a1Q8R429 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Atp2a1Q8R429 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
Atp2a1Q8R429 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atp2a1Q8R429 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Atp2a1Q8R429 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Atp2a1Q8R429 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.04■■□□□ 1.6
Atp2a1Q8R429 Gm5812-201ENSMUST00000061073 957 ntBASIC25.03■■□□□ 1.6
Atp2a1Q8R429 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Atp2a1Q8R429 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
Atp2a1Q8R429 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Atp2a1Q8R429 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC25.01■■□□□ 1.59
Atp2a1Q8R429 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms