Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Alms1Q8K4E0 Gm14117-201ENSMUST00000122417 843 ntBASIC22.33■■□□□ 1.16
Alms1Q8K4E0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
Alms1Q8K4E0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Alms1Q8K4E0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.31■■□□□ 1.16
Alms1Q8K4E0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.3■■□□□ 1.16
Alms1Q8K4E0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Alms1Q8K4E0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Alms1Q8K4E0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Alms1Q8K4E0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
Alms1Q8K4E0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Alms1Q8K4E0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Alms1Q8K4E0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Alms1Q8K4E0 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Gm43566-201ENSMUST00000196851 808 ntBASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Alms1Q8K4E0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Alms1Q8K4E0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Alms1Q8K4E0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Alms1Q8K4E0 Terc-201ENSMUST00000082862 423 ntBASIC22.24■■□□□ 1.15
Alms1Q8K4E0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Alms1Q8K4E0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.24■■□□□ 1.15
Alms1Q8K4E0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Alms1Q8K4E0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.24■■□□□ 1.15
Alms1Q8K4E0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Gm45444-201ENSMUST00000211394 898 ntBASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Alms1Q8K4E0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.22■■□□□ 1.15
Alms1Q8K4E0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Alms1Q8K4E0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Alms1Q8K4E0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Alms1Q8K4E0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Alms1Q8K4E0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Alms1Q8K4E0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.19■■□□□ 1.14
Alms1Q8K4E0 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Alms1Q8K4E0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Alms1Q8K4E0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Alms1Q8K4E0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.18■■□□□ 1.14
Alms1Q8K4E0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Alms1Q8K4E0 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Alms1Q8K4E0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.17■■□□□ 1.14
Alms1Q8K4E0 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.16■■□□□ 1.14
Alms1Q8K4E0 Serp2-204ENSMUST00000228055 705 ntBASIC22.16■■□□□ 1.14
Alms1Q8K4E0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Alms1Q8K4E0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Alms1Q8K4E0 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.15■■□□□ 1.14
Alms1Q8K4E0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Alms1Q8K4E0 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Alms1Q8K4E0 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Alms1Q8K4E0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
Alms1Q8K4E0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms