Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rtn4rl1Q8K0S5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rtn4rl1Q8K0S5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rtn4rl1Q8K0S5 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn4rl1Q8K0S5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn4rl1Q8K0S5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.27■■□□□ 1.32
Rtn4rl1Q8K0S5 Gm45444-201ENSMUST00000211394 898 ntBASIC23.26■■□□□ 1.31
Rtn4rl1Q8K0S5 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC23.25■■□□□ 1.31
Rtn4rl1Q8K0S5 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Gm15820-201ENSMUST00000201566 728 ntBASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rtn4rl1Q8K0S5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn4rl1Q8K0S5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn4rl1Q8K0S5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn4rl1Q8K0S5 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn4rl1Q8K0S5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn4rl1Q8K0S5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn4rl1Q8K0S5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Rps24-207ENSMUST00000224568 714 ntBASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn4rl1Q8K0S5 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm45102-201ENSMUST00000207427 857 ntBASIC23.17■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.16■■□□□ 1.3
Rtn4rl1Q8K0S5 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rtn4rl1Q8K0S5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn4rl1Q8K0S5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn4rl1Q8K0S5 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rtn4rl1Q8K0S5 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rtn4rl1Q8K0S5 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rtn4rl1Q8K0S5 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Gm14117-201ENSMUST00000122417 843 ntBASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rtn4rl1Q8K0S5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rtn4rl1Q8K0S5 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Rtn4rl1Q8K0S5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rtn4rl1Q8K0S5 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms