Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Cdk5rap1Q8BTW8 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk5rap1Q8BTW8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC21.44■■□□□ 1.02
Cdk5rap1Q8BTW8 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Cdk5rap1Q8BTW8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Cdk5rap1Q8BTW8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk5rap1Q8BTW8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk5rap1Q8BTW8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Cdk5rap1Q8BTW8 Gm10420-201ENSMUST00000121713 882 ntBASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Cdk5rap1Q8BTW8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk5rap1Q8BTW8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk5rap1Q8BTW8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Cdk5rap1Q8BTW8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Cdk5rap1Q8BTW8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
Cdk5rap1Q8BTW8 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cdk5rap1Q8BTW8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Cdk5rap1Q8BTW8 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.39■■□□□ 1.01
Cdk5rap1Q8BTW8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Cdk5rap1Q8BTW8 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Cdk5rap1Q8BTW8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk5rap1Q8BTW8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk5rap1Q8BTW8 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Cdk5rap1Q8BTW8 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Cdk5rap1Q8BTW8 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Cdk5rap1Q8BTW8 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Cdk5rap1Q8BTW8 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.36■■□□□ 1.01
Cdk5rap1Q8BTW8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Cdk5rap1Q8BTW8 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Cdk5rap1Q8BTW8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Cdk5rap1Q8BTW8 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.34■■□□□ 1.01
Cdk5rap1Q8BTW8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Cdk5rap1Q8BTW8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdk5rap1Q8BTW8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdk5rap1Q8BTW8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdk5rap1Q8BTW8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Cdk5rap1Q8BTW8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Cdk5rap1Q8BTW8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Cdk5rap1Q8BTW8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.32■■□□□ 1
Cdk5rap1Q8BTW8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Cdk5rap1Q8BTW8 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.32■■□□□ 1
Cdk5rap1Q8BTW8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.32■■□□□ 1
Cdk5rap1Q8BTW8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Cdk5rap1Q8BTW8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.31■■□□□ 1
Cdk5rap1Q8BTW8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdk5rap1Q8BTW8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
Cdk5rap1Q8BTW8 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Cdk5rap1Q8BTW8 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Cdk5rap1Q8BTW8 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Cdk5rap1Q8BTW8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdk5rap1Q8BTW8 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC21.28■■□□□ 1
Cdk5rap1Q8BTW8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Cdk5rap1Q8BTW8 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Cdk5rap1Q8BTW8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Cdk5rap1Q8BTW8 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cdk5rap1Q8BTW8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Cdk5rap1Q8BTW8 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.27■■□□□ 1
Cdk5rap1Q8BTW8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Cdk5rap1Q8BTW8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdk5rap1Q8BTW8 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.26■□□□□ 0.99
Cdk5rap1Q8BTW8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdk5rap1Q8BTW8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Cdk5rap1Q8BTW8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Cdk5rap1Q8BTW8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdk5rap1Q8BTW8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdk5rap1Q8BTW8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
Cdk5rap1Q8BTW8 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Cdk5rap1Q8BTW8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Cdk5rap1Q8BTW8 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdk5rap1Q8BTW8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Cdk5rap1Q8BTW8 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms