Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Prdm4Q80V63 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prdm4Q80V63 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Prdm4Q80V63 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prdm4Q80V63 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.26■■□□□ 1.31
Prdm4Q80V63 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prdm4Q80V63 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Prdm4Q80V63 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Prdm4Q80V63 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Prdm4Q80V63 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prdm4Q80V63 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prdm4Q80V63 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
Prdm4Q80V63 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.24■■□□□ 1.31
Prdm4Q80V63 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prdm4Q80V63 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prdm4Q80V63 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prdm4Q80V63 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prdm4Q80V63 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Prdm4Q80V63 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.22■■□□□ 1.31
Prdm4Q80V63 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Prdm4Q80V63 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Prdm4Q80V63 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Prdm4Q80V63 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.21■■□□□ 1.31
Prdm4Q80V63 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.2■■□□□ 1.3
Prdm4Q80V63 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prdm4Q80V63 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Prdm4Q80V63 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.19■■□□□ 1.3
Prdm4Q80V63 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Prdm4Q80V63 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Prdm4Q80V63 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Prdm4Q80V63 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC23.16■■□□□ 1.3
Prdm4Q80V63 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Prdm4Q80V63 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Prdm4Q80V63 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Prdm4Q80V63 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 Gm10616-201ENSMUST00000205285 2127 ntBASIC23.15■■□□□ 1.3
Prdm4Q80V63 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.15■■□□□ 1.3
Prdm4Q80V63 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Prdm4Q80V63 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prdm4Q80V63 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Prdm4Q80V63 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Prdm4Q80V63 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prdm4Q80V63 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prdm4Q80V63 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Prdm4Q80V63 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Prdm4Q80V63 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Prdm4Q80V63 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prdm4Q80V63 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Prdm4Q80V63 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prdm4Q80V63 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Prdm4Q80V63 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prdm4Q80V63 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
Prdm4Q80V63 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prdm4Q80V63 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prdm4Q80V63 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prdm4Q80V63 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prdm4Q80V63 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Prdm4Q80V63 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prdm4Q80V63 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Prdm4Q80V63 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prdm4Q80V63 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prdm4Q80V63 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Prdm4Q80V63 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Prdm4Q80V63 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.07■■□□□ 1.28
Prdm4Q80V63 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prdm4Q80V63 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Prdm4Q80V63 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Prdm4Q80V63 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.06■■□□□ 1.28
Prdm4Q80V63 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prdm4Q80V63 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prdm4Q80V63 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prdm4Q80V63 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms