Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav7-2Q5R1I3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trav7-2Q5R1I3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav7-2Q5R1I3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Gm11599-201ENSMUST00000118720 878 ntBASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.54■□□□□ 0.24
Trav7-2Q5R1I3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Trav7-2Q5R1I3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-2Q5R1I3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav7-2Q5R1I3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-2Q5R1I3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-2Q5R1I3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav7-2Q5R1I3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav7-2Q5R1I3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav7-2Q5R1I3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-2Q5R1I3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC16.5■□□□□ 0.23
Trav7-2Q5R1I3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-2Q5R1I3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-2Q5R1I3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav7-2Q5R1I3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-2Q5R1I3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav7-2Q5R1I3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav7-2Q5R1I3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-2Q5R1I3 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.47■□□□□ 0.23
Trav7-2Q5R1I3 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-2Q5R1I3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav7-2Q5R1I3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav7-2Q5R1I3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav7-2Q5R1I3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav7-2Q5R1I3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Gm4799-201ENSMUST00000095396 657 ntBASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav7-2Q5R1I3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav7-2Q5R1I3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms