Protein–RNA interactions for Protein: Q3U5Q7

Cmpk2, UMP-CMP kinase 2, mitochondrial, mousemouse

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cmpk2Q3U5Q7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cmpk2Q3U5Q7 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.97■□□□□ 0.95
Cmpk2Q3U5Q7 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cmpk2Q3U5Q7 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cmpk2Q3U5Q7 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cmpk2Q3U5Q7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cmpk2Q3U5Q7 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cmpk2Q3U5Q7 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cmpk2Q3U5Q7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.93■□□□□ 0.94
Cmpk2Q3U5Q7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cmpk2Q3U5Q7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cmpk2Q3U5Q7 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cmpk2Q3U5Q7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cmpk2Q3U5Q7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cmpk2Q3U5Q7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cmpk2Q3U5Q7 Notumos-201ENSMUST00000151998 2659 ntBASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cmpk2Q3U5Q7 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Cmpk2Q3U5Q7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cmpk2Q3U5Q7 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cmpk2Q3U5Q7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cmpk2Q3U5Q7 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cmpk2Q3U5Q7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cmpk2Q3U5Q7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Gm7432-201ENSMUST00000210343 879 ntBASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cmpk2Q3U5Q7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.86■□□□□ 0.93
Cmpk2Q3U5Q7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cmpk2Q3U5Q7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cmpk2Q3U5Q7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cmpk2Q3U5Q7 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cmpk2Q3U5Q7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.83■□□□□ 0.93
Cmpk2Q3U5Q7 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cmpk2Q3U5Q7 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmpk2Q3U5Q7 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cmpk2Q3U5Q7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmpk2Q3U5Q7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cmpk2Q3U5Q7 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cmpk2Q3U5Q7 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.81■□□□□ 0.92
Cmpk2Q3U5Q7 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cmpk2Q3U5Q7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Cmpk2Q3U5Q7 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cmpk2Q3U5Q7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.81■□□□□ 0.92
Cmpk2Q3U5Q7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cmpk2Q3U5Q7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cmpk2Q3U5Q7 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cmpk2Q3U5Q7 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cmpk2Q3U5Q7 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cmpk2Q3U5Q7 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms