Protein–RNA interactions for Protein: Q3U1D0

Lins1, Protein Lines homolog 1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lins1Q3U1D0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Lins1Q3U1D0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Lins1Q3U1D0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Lins1Q3U1D0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Lins1Q3U1D0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Lins1Q3U1D0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Lins1Q3U1D0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC27.02■■□□□ 1.92
Lins1Q3U1D0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Lins1Q3U1D0 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Lins1Q3U1D0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lins1Q3U1D0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lins1Q3U1D0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Lins1Q3U1D0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Lins1Q3U1D0 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC27■■□□□ 1.91
Lins1Q3U1D0 Gm4419-202ENSMUST00000226239 1431 ntBASIC26.99■■□□□ 1.91
Lins1Q3U1D0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lins1Q3U1D0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Lins1Q3U1D0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Lins1Q3U1D0 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
Lins1Q3U1D0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Gm44428-201ENSMUST00000204474 874 ntBASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Lins1Q3U1D0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Lins1Q3U1D0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
Lins1Q3U1D0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC26.95■■□□□ 1.9
Lins1Q3U1D0 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC26.95■■□□□ 1.9
Lins1Q3U1D0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Lins1Q3U1D0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Lins1Q3U1D0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Lins1Q3U1D0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lins1Q3U1D0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lins1Q3U1D0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lins1Q3U1D0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lins1Q3U1D0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Lins1Q3U1D0 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Lins1Q3U1D0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Lins1Q3U1D0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Lins1Q3U1D0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Lins1Q3U1D0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Lins1Q3U1D0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Lins1Q3U1D0 Gm5921-201ENSMUST00000075898 882 ntBASIC26.92■■□□□ 1.9
Lins1Q3U1D0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC26.92■■□□□ 1.9
Lins1Q3U1D0 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Lins1Q3U1D0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Lins1Q3U1D0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Lins1Q3U1D0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC26.89■■□□□ 1.9
Lins1Q3U1D0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
Lins1Q3U1D0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Lins1Q3U1D0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
Lins1Q3U1D0 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.87■■□□□ 1.89
Lins1Q3U1D0 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.87■■□□□ 1.89
Lins1Q3U1D0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Lins1Q3U1D0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Lins1Q3U1D0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Lins1Q3U1D0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Lins1Q3U1D0 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Lins1Q3U1D0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
Lins1Q3U1D0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
Lins1Q3U1D0 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Gm5812-201ENSMUST00000061073 957 ntBASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Lins1Q3U1D0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Lins1Q3U1D0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Lins1Q3U1D0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC26.8■■□□□ 1.88
Lins1Q3U1D0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Lins1Q3U1D0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Lins1Q3U1D0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Lins1Q3U1D0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Lins1Q3U1D0 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.78■■□□□ 1.88
Lins1Q3U1D0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
Lins1Q3U1D0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Lins1Q3U1D0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Lins1Q3U1D0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Lins1Q3U1D0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Lins1Q3U1D0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Lins1Q3U1D0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.76■■□□□ 1.87
Lins1Q3U1D0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC26.76■■□□□ 1.87
Lins1Q3U1D0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Lins1Q3U1D0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms