Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Capns1O88456 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capns1O88456 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Capns1O88456 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Capns1O88456 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.65■□□□□ 0.9
Capns1O88456 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Capns1O88456 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
Capns1O88456 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Capns1O88456 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Capns1O88456 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Capns1O88456 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.64■□□□□ 0.89
Capns1O88456 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Capns1O88456 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Capns1O88456 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Capns1O88456 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Capns1O88456 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.63■□□□□ 0.89
Capns1O88456 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Capns1O88456 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Capns1O88456 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Capns1O88456 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Capns1O88456 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
Capns1O88456 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Capns1O88456 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Capns1O88456 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.61■□□□□ 0.89
Capns1O88456 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Capns1O88456 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Capns1O88456 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
Capns1O88456 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capns1O88456 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capns1O88456 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Capns1O88456 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC20.6■□□□□ 0.89
Capns1O88456 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Capns1O88456 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.6■□□□□ 0.89
Capns1O88456 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capns1O88456 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capns1O88456 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Capns1O88456 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Capns1O88456 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capns1O88456 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Capns1O88456 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Capns1O88456 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Capns1O88456 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.57■□□□□ 0.88
Capns1O88456 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capns1O88456 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Capns1O88456 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Capns1O88456 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Capns1O88456 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Capns1O88456 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Gm11599-201ENSMUST00000118720 878 ntBASIC20.56■□□□□ 0.88
Capns1O88456 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Capns1O88456 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Capns1O88456 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Capns1O88456 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Capns1O88456 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Capns1O88456 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Capns1O88456 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Capns1O88456 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Capns1O88456 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capns1O88456 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Capns1O88456 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capns1O88456 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capns1O88456 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capns1O88456 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capns1O88456 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capns1O88456 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capns1O88456 Mir6538-201ENSMUST00000183713 110 ntBASIC20.53■□□□□ 0.88
Capns1O88456 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.53■□□□□ 0.88
Capns1O88456 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capns1O88456 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capns1O88456 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capns1O88456 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capns1O88456 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capns1O88456 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capns1O88456 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capns1O88456 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capns1O88456 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms