Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AC009947.1-201ENST00000444350 727 ntBASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 AC134684.3-201ENST00000641758 218 ntBASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCFC2Q9Y5Z7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 AC007967.3-201ENST00000434308 558 ntBASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 AC002347.1-201ENST00000569543 541 ntBASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
HCFC2Q9Y5Z7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 BX005266.1-201ENST00000473402 457 ntBASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 AC027796.2-201ENST00000575326 344 ntBASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HCFC2Q9Y5Z7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AC079776.2-201ENST00000641154 1609 ntBASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AC023274.1-201ENST00000418278 595 ntBASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCFC2Q9Y5Z7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms